COBY

v1.0.14 suspicious
5.0
Medium Risk

Build coarse-grained molecular systems

πŸ€– AI Analysis

Final verdict: SUSPICIOUS

The package shows signs of potential obfuscation that could be used to hide malicious activity, combined with an incomplete and possibly inactive maintainer profile.

  • High obfuscation risk
  • Incomplete maintainer profile
Per-check LLM notes
  • Network: No network calls detected, which is normal unless the package requires external communication.
  • Shell: No shell execution patterns detected, indicating no direct system command execution.
  • Obfuscation: The obfuscation pattern suggests an attempt to hide code execution details, which could indicate malicious intent or an effort to avoid detection.
  • Credentials: No clear patterns of credential harvesting were detected, suggesting a low risk of direct credential theft.
  • Metadata: The maintainer has an incomplete profile and seems new or inactive, raising some suspicion but not conclusive evidence of malice.

πŸ”¬ Heuristic Checks

βœ“ Outbound Network Calls

No suspicious network call patterns found

⚠ Code Obfuscation score 2.0

Found 1 obfuscation pattern(s)

  • ile in defs_files: defs = __import__(defs_file, fromlist=['']) if hasattr(defs, "fragment_defs"): fragment_de
βœ“ Shell / Subprocess Execution

No shell execution patterns detected

βœ“ Credential Harvesting

No credential harvesting patterns detected

βœ“ Typosquatting

No typosquatting candidates detected

βœ“ Registered Email Domain

Email domain looks legitimate: hotmail.com>

βœ“ Suspicious Page Links

All external links appear legitimate

βœ“ Git Repository History

Repository MikkelDA/COBY appears legitimate

⚠ Maintainer History score 4.0

2 maintainer concern(s) found

  • Author name is missing or very short
  • Author "" appears to have only 1 package on PyPI (new or inactive account)
βœ“ Known CVE Vulnerabilities

No known vulnerabilities found in OSV database.

πŸ’‘ AI App Starter Prompt

Use this prompt to build a project with COBY
Create a user-friendly desktop application named 'MolSysBuilder' using Python and the COBY package. This application will allow users to build coarse-grained molecular systems from scratch or import existing molecular structures in various formats (e.g., PDB, XYZ). Here’s a detailed breakdown of the steps and features your application should include:

1. **User Interface Design**: Develop an intuitive graphical interface using Tkinter or PyQt. The UI should have sections for file input/output, parameter settings, and visualization.
2. **File Import/Export**: Implement functionality to import molecular structures from common file formats like PDB, XYZ, etc. Additionally, provide options to export the generated coarse-grained models back into these formats.
3. **Parameter Configuration**: Allow users to customize parameters such as bead types, force fields, and bond definitions directly within the application. Provide default configurations based on typical coarse-graining practices.
4. **Coarse-Graining Process**: Utilize the COBY package to perform the actual coarse-graining process. Integrate COBY's functions to define beads, apply force fields, and generate the final coarse-grained model.
5. **Visualization Tool**: Incorporate a simple visualization tool within the application to display the original and coarse-grained molecular structures side-by-side. Use libraries like Matplotlib or PyMOL for this purpose.
6. **Documentation and Help**: Include a comprehensive help section that explains the basics of coarse-graining, the functionalities of the application, and how to use COBY effectively.
7. **Testing and Validation**: Ensure thorough testing of the application with different molecular structures and parameter sets. Validate the output against known coarse-grained models if possible.

Your task is to write the necessary Python code to implement each feature, ensuring that the COBY package is utilized efficiently throughout the coarse-graining process. Document your code clearly and provide instructions on setting up and running the application.